ABOUT THIS RECORDspecies: Litopenaeus vannamei
miRNA family: miR-466h
source: miRNEST
Taxonomy by NCBI:
Litopenaeus vannamei Litopenaeus Penaeidae Penaeoidea Dendrobranchiata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCGCACGCACACACACACAC miRNA* GTGTGTGTGTGTGTGTGTGTG mismatches: 0 bulges: 0 |
pre-miRNA
TATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATGCCCGTACTGTCACACGCATACATGATCCACCCGCGCACGCACACACACACAC
GCACACTCACACTTACACA
dot-bracket secondary structure
..((((((((((((((((((((((((((((((((((((((((.((......))..)).)))))))).............)))))))))))))))))))))
)))))))))..........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TATGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCATGCCCGTACTGTCACACGCATACATGATCCACCCGCGCACGCACACACACACAC
GCACACTCACACTTACACA
dot-bracket secondary structure
..((((((((((((((((((((((((((((((((((((((((.((......))..)).)))))))).............)))))))))))))))))))))
)))))))))..........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
