miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gallus gallus, Anolis carolinensis, Taeniopygia guttata, Meleagris gallopavo, Lonchura striata domestica



ABOUT THIS RECORD

ID: MNEST007619
species: Anolis carolinensis
miRNA family: miR-2187
source: miRNEST

Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTCAGGCTATCCTAATCTAC

miRNA*
 AGAGTAGGTGGATGAAAAT

mismatches: 4
bulges: 2
View larger
pre-miRNA
 TTCCTCCTCATTTTCAGGCTATCCTAATCTACCAGTTTCTCAGATTTACCTGCTTAAGTTTGTTCTGTGTTTCAAGAATGTTCTTTTCCACCTGGTCAGC
ACTTCTTTGCATCCGGGAAATGAGCACGGCCAAGTCATTGCTTCCCGAGGACCTAAAAGCAAGAAAACAGAGAGTAGGTGGATGAAAATAAAAATAA

dot-bracket secondary structure
.........(((((((..(((.((((.(((.....((((...(((((.(((((((.((..((((((........))))))..))(((((....((...((
(......)))..)).))))).))))).))..))))).((((((((...)))......)))))))))....))).))))))).)))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q9D952|EVPL_MOUSE: 0.0001

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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