miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium hirsutum



ABOUT THIS RECORD

ID: MNEST000763
species: Gossypium hirsutum
miRNA family: MIRf1061
source: miRNEST

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTACCAATTCTGAATCAGGGG

miRNA*
 TCTGATGTCAAAACTGAGCTC

mismatches: 3
bulges: 2
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pre-miRNA
 ATCCCAAAAACTACTCCATCCTGTGAAGAGGTGGATACGGATGCAGCTGCCCTAGCTTCTACTTCTGATGTCAAAACTGAGCTCATGGTTGATGAGACTA
TTTGTACCAATTCTGAATCAGGGGAATAATCTCTCTTCTTGTTTTATGATGAAAGTCGTGACGCTCAATAGAGAGACGGAAAAG

dot-bracket secondary structure
..............((((((((....)).))))))...(((...(((((...)))))))).((((((((.(((.((.((.((..((((((.....)))))
)..))..)).)).))))))))))).....(((((((....((.(((((((....))))))).)).....)))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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