ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: miR-3116
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCTGGAACATAGTAGGCAA miRNA* GTCTTTGTATTCTTAGCACT mismatches: 3 bulges: 1 |
pre-miRNA
TTTTTTGTTTTTGTCTTTGTATTCTTAGCACTATGCAAGGTGCCTGGAACATAGTAGGCAATAATATATG
dot-bracket secondary structure
.....((((.((((((((((.((((..(((((......)))))..)))).)))).)))))).))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTTTTTGTTTTTGTCTTTGTATTCTTAGCACTATGCAAGGTGCCTGGAACATAGTAGGCAATAATATATG
dot-bracket secondary structure
.....((((.((((((((((.((((..(((((......)))))..)))).)))).)))))).))))....
SIMILARITIES| miRBase hsa-mir-3116-1: 0.00005 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
