ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: miR-1019
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTAATTCCAAATTGCTTTC miRNA* AACAGATTGGAGAATCATCA mismatches: 5 bulges: 1 |
pre-miRNA
GCTGTTTAGTAACTTTTTTGTGTGTAATTCCAAATTGCTTTCCAGAATGGTTGTATCCATTCACAGTTCAACCAATAGTGCATCAATGTGTCTGTTTTCT
TATAACTCTCCCGATATTTATCATTTTTTAGAAAATTCTTTGCCACTCTGATGTGTGTGTGTTGGATTGATAAACAGATTGGAGAATCATCATAGAGGTA
ATTGAATCTG
dot-bracket secondary structure
...(((((((.((((((.((.(((...((((((.(((.(((...((((((......)))))).(((((((((((...((((((((..(((...(((((((
............(((....))).......))))))).......)))..)))))))).)).)))))))))..)))))).))))))...))))).)))))).
)))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GCTGTTTAGTAACTTTTTTGTGTGTAATTCCAAATTGCTTTCCAGAATGGTTGTATCCATTCACAGTTCAACCAATAGTGCATCAATGTGTCTGTTTTCT
TATAACTCTCCCGATATTTATCATTTTTTAGAAAATTCTTTGCCACTCTGATGTGTGTGTGTTGGATTGATAAACAGATTGGAGAATCATCATAGAGGTA
ATTGAATCTG
dot-bracket secondary structure
...(((((((.((((((.((.(((...((((((.(((.(((...((((((......)))))).(((((((((((...((((((((..(((...(((((((
............(((....))).......))))))).......)))..)))))))).)).)))))))))..)))))).))))))...))))).)))))).
)))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
