ABOUT THIS RECORDspecies: Trichosurus vulpecula
miRNA family: mir-147
source: miRNEST
Taxonomy by NCBI:
Trichosurus vulpecula Trichosurus Phalangeridae Diprotodontia Metatheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGTGCGGAAGTGCTTCTGCT miRNA* CGGAAACATTTCTGCACAAAC mismatches: 2 bulges: 0 |
pre-miRNA
AGAACACTCTATGAATCTAGCGGAAACATTTCTGCACAAACTATACTACTGAAACCAGTGTGCGGAAGTGCTTCTGCTACATTTTTAGGGTCTCC
dot-bracket secondary structure
.....((((((.((((.((((((((.((((((((((((....................)))))))))))).)))))))).)))).))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGAACACTCTATGAATCTAGCGGAAACATTTCTGCACAAACTATACTACTGAAACCAGTGTGCGGAAGTGCTTCTGCTACATTTTTAGGGTCTCC
dot-bracket secondary structure
.....((((((.((((.((((((((.((((((((((((....................)))))))))))).)))))))).)))).))))))....
SIMILARITIES| miRBase mdo-mir-147b: 1e-31 PMRD no hits microPC no hits | UniProt no hits RFAM mir-147: 3e-23 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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