miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007739
species: Papio anubis
miRNA family: miR-21
source: miRNEST

Taxonomy by NCBI:
Papio anubis Papio Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAACACCAGTCGATGGGCTGT

miRNA*
 AGCTTATCAGACTGATGTTGAC

mismatches: 1
bulges: 1
View larger
pre-miRNA
 GACATCTCCATGGCTGTACCACCTTGTCGGGTAGCTTATCAGACTGATGTTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTGACATTTT
GGTATCTTTCATCTGACCA

dot-bracket secondary structure
....((...((((..((((((...((((((((((((((((.(((((.(((((.((((.((...))))))))))).)))))))))))))))))))))...)
)))))...))))..))...


SIMILARITIES
miRBase cgr-mir-21: 9e-45

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-21: 5e-22		most similar mature miRNAs

Identical with: ggo-mir-21 from miRBase (MNEST028268)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
additional data
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