ABOUT THIS RECORDspecies: Ictalurus furcatus
miRNA family: mir-568
source: miRNEST
Taxonomy by NCBI:
Ictalurus furcatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGTATAAATGTACACACACT miRNA* TGTGCTGTAATGTATATGTGA mismatches: 4 bulges: 2 |
pre-miRNA
AAAGAATTTGACTGTGCTGTAATGTATATGTGATAAATAAAGACTTCTTCTTATGTATAAATGTACACACACTCAGGAGCAC
dot-bracket secondary structure
......(((((.((((.((((...(((((((((.((...........)).)))))))))....)))))))).))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AAAGAATTTGACTGTGCTGTAATGTATATGTGATAAATAAAGACTTCTTCTTATGTATAAATGTACACACACTCAGGAGCAC
dot-bracket secondary structure
......(((((.((((.((((...(((((((((.((...........)).)))))))))....)))))))).))))).....
SIMILARITIES| miRBase cfa-mir-568: 0.001 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
