miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Ictalurus punctatus, Pimephales promelas, Ictalurus furcatus, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST007776
species: Ictalurus furcatus
miRNA family: miR-4194
source: miRNEST

Taxonomy by NCBI:
Ictalurus furcatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATATATATGTGTGTGTGTA

miRNA*
 CGCCACAACAGTTATAACGGC

mismatches: 3
bulges: 2
View larger
pre-miRNA
 CAGTCCAGAGTTGATATATATGTGTGTGTGTATATTTGTTTTATTCCTCTTACGCCACAACAGTTATAACGGCTCATTTTT

dot-bracket secondary structure
.......((((((.((((..((((((.(((((..................)))))))).)))..)))).))))))......


SIMILARITIES
miRBase mmu-mir-467g: 0.00001

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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