miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Lepeophtheirus salmonis, Caligus rogercresseyi, Lernaeocera branchialis, Caligus clemensi



ABOUT THIS RECORD

ID: MNEST007782
species: Lepeophtheirus salmonis
miRNA family: miR-4286
source: miRNEST

Taxonomy by NCBI:
Lepeophtheirus salmonis Lepeophtheirus Caligidae Siphonostomatoida Podoplea Neocopepoda Copepoda Maxillopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCCACTCCTGGTACCAACT

miRNA*
 TATCAACCAGAGGTGGGGACT

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TCAAATAAGCCATTTTAATTAGTATCAACCAGAGGTGGGGACTTGCTATTCAAGTCCATATTTTGAAGGCTTACACCTTCACTTGATACCACAATCAAAG
ACTGGAGACTTGAGTTGGACTCAAAAGTACTTTTCATGGTGTATAAACTACAGTCAAGGACTTTTCCCCACTCCTGGTACCAACTATTAAAATGACACAT
TTAA

dot-bracket secondary structure
..........(((((((((.(((....(((((.((((((((..........((((((......((((((......)))))).(((((......))))).(
((((.((..((((((...))))))..((((..(.....).))))...)).)))))..)))))).)))))))).)))))....))))))))))))......
....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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