ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1271
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCTTCTATGTGCCAGGCAC miRNA* GAGTGGTATACAGGAGCTCCACT mismatches: 4 bulges: 2 |
pre-miRNA
GACAAGTAGAGTGAGTGGTATACAGGAGCTCCACTATTTTGCAACTTTCCTGTAAGTCTAAAGATGGGTTTATAATTAAAAATTTAAAACAAATTAGAAG
CATACACCAAAATCCTTGCATTTACAGATTTAGCGAATATTTATTAAGTGCCTTCTATGTGCCAGGCACTGGACATTG
dot-bracket secondary structure
.....((..((((..(((((((.(((((...((((..(((((.......((((((((.(((.(((.(((.(((..((...(((((.....)))))..)).
.))).)))...))).))).)))))))).....))))).........)))).))))).)))))))..))))..))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GACAAGTAGAGTGAGTGGTATACAGGAGCTCCACTATTTTGCAACTTTCCTGTAAGTCTAAAGATGGGTTTATAATTAAAAATTTAAAACAAATTAGAAG
CATACACCAAAATCCTTGCATTTACAGATTTAGCGAATATTTATTAAGTGCCTTCTATGTGCCAGGCACTGGACATTG
dot-bracket secondary structure
.....((..((((..(((((((.(((((...((((..(((((.......((((((((.(((.(((.(((.(((..((...(((((.....)))))..)).
.))).)))...))).))).)))))))).....))))).........)))).))))).)))))))..))))..))....
SIMILARITIES| miRBase hsa-mir-1271: 0.0001 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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