ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-1181
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCGTCGCCGCCACCCGAGCCG miRNA* GCCCGGGTGGAACGCATGG mismatches: 4 bulges: 2 |
pre-miRNA
GCCGTCGCCGCCACCCGAGCCGGAGCGNGCTGGGCGCCAAGGCAAGATGGTGGACTACAGCGTGTGGGACCACATTGAGGTGTCTGATGATGAAGACGAG
ACGCACCCCAACATCGACACGGCCAGTCTCTTCCGCTGGCGGCATCAGGCCCGGGTGGAACGCATGG
dot-bracket secondary structure
.((((.((..(((((((.(((.((((..(((.........)))..((((.(((.(((((...)))))..)))))))...(((((.((((.((........
........)).))))))))).((((((.......)))))).)).)).))).)))))))...))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
Source sequences
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GCCGTCGCCGCCACCCGAGCCGGAGCGNGCTGGGCGCCAAGGCAAGATGGTGGACTACAGCGTGTGGGACCACATTGAGGTGTCTGATGATGAAGACGAG
ACGCACCCCAACATCGACACGGCCAGTCTCTTCCGCTGGCGGCATCAGGCCCGGGTGGAACGCATGG
dot-bracket secondary structure
.((((.((..(((((((.(((.((((..(((.........)))..((((.(((.(((((...)))))..)))))))...(((((.((((.((........
........)).))))))))).((((((.......)))))).)).)).))).)))))))...))))))
SIMILARITIES| miRBase hsa-mir-1181: 1e-26 PMRD no hits microPC no hits | UniProt sp|Q63692|CDC37_RAT: 5e-18 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
Source sequences
download this record
