miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007903
species: Homo sapiens
miRNA family: mir-548
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAAATAATTGCGGTTTTTGC

miRNA*
 AAAATCCGCAAGTACTTTTGC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TGCATCATATTAGGTTGAAGCAAAAATAATTGCGGTTTTTGCCATTAAAAGTAAAGCAAAATCCGCAAGTACTTTTGCACCAACCTAACAGCAATA

dot-bracket secondary structure
(((......((((((((..((((((.((.((((((.((((((..(((....))).)))))).)))))).)).))))))..))))))))..)))...


SIMILARITIES
miRBase hsa-mir-548k: 1e-49

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-548: 2e-18		most similar mature miRNAs

Identical with: ptr-mir-548k from miRBase (MNEST030484)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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