ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-198
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTCCAGAGGGGAGATAGG miRNA* TTCTTCTCTATAGAATAA mismatches: 4 bulges: 1 |
pre-miRNA
CATTGGTCCAGAGGGGAGATAGGTTCCTGTGATTTTTCCTTCTTCTCTATAGAATAAA
dot-bracket secondary structure
..(((.((...((((((((.(((.((....)).....)))))))))))...)).))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CATTGGTCCAGAGGGGAGATAGGTTCCTGTGATTTTTCCTTCTTCTCTATAGAATAAA
dot-bracket secondary structure
..(((.((...((((((((.(((.((....)).....)))))))))))...)).))).
SIMILARITIES| miRBase ggo-mir-198: 3e-27 PMRD no hits microPC no hits | UniProt no hits RFAM mir-198: 3e-21 | most similar mature miRNAs |
Identical with: ggo-mir-198 from miRBase (MNEST028325) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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