miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Homo sapiens, Pongo abelii, Pan troglodytes verus



ABOUT THIS RECORD

ID: MNEST008039
species: Homo sapiens
miRNA family: mir-1273
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGTGACAGAGCAAGACTCTG

miRNA*
GAGTTTCGCTCTTGTTGCCCAG

mismatches: 1
bulges: 1

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pre-miRNA
ATTTTTATTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAGTGGAGTGATCTCGGCTCACCACAACCTCCGCCTGGGTGACAGAGCAAG
ACTCTG
TCTGAGAAAAAAAGAAAGATAAATTATAC


dot-bracket secondary structure
.(((((.(((((.(((((((((((.(((((.(((((((((((.((((....(((((((.......)))..))))...)))))))))))))))))))).))
))))))
))).))))).)))))..............



SIMILARITIES
miRBase ppy-mir-1273: 0.0000000004

PMRD no hits

microPC no hits
UniProt sp|Q96NF6|CH049_HUMAN: 0.000002

RFAM U2: 1e-26
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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