miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000804
species: Gossypium raimondii
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTCCTCCTCTTCCTCTTCCC

miRNA*
GAGGCGGGAAGAGGAGGACACG

mismatches: 3
bulges: 1

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pre-miRNA
ATAATACTGTATCTCCTCCTCTTCCTCTTCCCTCGCCGACGCCAGACGGCGGTCGGAGCTGCCGATGAGGCGCCGCAGTTGCAGGCTAAAACCGCGAGGC
GGAGGTCGGTATGGAGGCGGGAAGAGGAGGACACGTTGAGAAG


dot-bracket secondary structure
....((.(((...((((((((((((((((((...(((((((((...(((((((....)))))))....))).((((..((((.((......)))))).))
))..))))))..))))).))))))))))))).))).)).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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