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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000807
species: Gossypium raimondii
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGATAGAGAGCAC

miRNA*
 GCTCTCTATGCTTCTGTCATC

mismatches: 0
bulges: 1
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pre-miRNA
 GAGGTGTTGGTTGAAGAGGAGGCACTGGTGATTGTTGTTGACAGAAGATAGAGAGCACAGATGATGGTGTTGCCTATGTGCATGCATCCCACTCCTTTGT
GCTCTCTATGCTTCTGTCATCATCACCTTTCATAGCCCCTCTTTTAAACCCTAAAC

dot-bracket secondary structure
.(((.(((....(((((((.(((...((((((.(....(((((((((((((((((((((((.((.(((((.((......))..)))))....)).)))))
))))))))).))))))))).))))))).......))))))))))..))))))....


SIMILARITIES
miRBase gra-MIR157b: 2e-46

PMRD gra-miR157b: 2e-46

microPC miR157: 0.0000000000005		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: gra-MIR157b from miRBase (MNEST041077)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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