ABOUT THIS RECORDspecies: Gossypium raimondii
miRNA family: MIRf772
source: miRNEST
Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGCTCTTTATGCTTCTGTCA miRNA* ACAGAAGATAGAGAGCACAG mismatches: 0 bulges: 1 |
pre-miRNA
TTGTTGTTGACAGAAGATAGAGAGCACAGATGATGGTGTGCAATTAGGAGTCTTGAAGCAATGCATCCCACTCCTTTGTGCTCTTTATGCTTCTGTCATC
ACCT
dot-bracket secondary structure
....((.(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).))))))))).)
)...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGTTGTTGACAGAAGATAGAGAGCACAGATGATGGTGTGCAATTAGGAGTCTTGAAGCAATGCATCCCACTCCTTTGTGCTCTTTATGCTTCTGTCATC
ACCT
dot-bracket secondary structure
....((.(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).))))))))).)
)...
SIMILARITIES| miRBase gra-MIR157a: 1e-52 PMRD gra-miR157a: 1e-52 microPC miR157: 3e-47 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR157 from microPC (MNEST044919) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
