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Species belonging to selected taxon:

Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST000814
species: Gossypium raimondii
miRNA family: MIR413
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGTTTCTCTAGTTCTGCAC

miRNA*
 TTAGGACTAGGAAACAGAAA

mismatches: 4
bulges: 1
View larger
pre-miRNA
 TAATTATGTTTCCATCCTAATGTTTGGTTACGCCAGCCGGTCTACGGTTTAATGCATTTAGACATCTGATGTTGGTTTCTCTAGTTCTGCACTTATTCAT
TTATAGACAGGAAATTTGTATCTTTGTGTTTAGGACTAGGAAACAGAAAGGTGTTCAAAAGTTCCATTTGGCCTTGGCTGAGGACTTACTTTTAGCACAG
TGAATCAAGATCTGAAA

dot-bracket secondary structure
............((((...((((((((....((.(((((.....)))))....))..))))))))..))))...(((((.(((((((((.((.....((.
......((((.....)))).....)).)).))))))))))))))......(((((.((((((....((((((....)))))).....)))))))))))..
....(((.....)))..


SIMILARITIES
miRBase no hits

PMRD ghr-miR413: 2e-32

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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