miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Homo sapiens
ABOUT THIS RECORD
ID:
MNEST008168
species:
Homo sapiens
miRNA family:
mir-548
source:
miRNEST
Taxonomy by NCBI:
Homo sapiens
Homo
Homininae
Hominidae
Hominoidea
Catarrhini
Simiiformes
Haplorrhini
Primates
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAAACTGCAATTACTTTTGCA
miRNA*
CAAAAGTAATTGCGGTTATTTG
mismatches:
0
bulges:
1
View larger
pre-miRNA
CTCACACTTTATAGGCTAGTG
CAAAAGTAATTGCGGTTATTTG
CCATTAAAAGTAATTGCA
AAAACTGCAATTACTTTTGCA
TCAACCTAATACATCTTT
dot-bracket secondary structure
...........((((...(((
(((((((((((((((((.((((
(.((((....)))).)))
)))))))))))))))))))))
)...))))..........
SIMILARITIES
miRBase
hsa-mir-548aj-2
:
6e-21
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-548: 4e-22
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record