miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000818
species: Gossypium raimondii
miRNA family: MIRf1281
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTGTTTGGTTGCTGAGAAAA

miRNA*
 TTCTCAGCAACCAAACGGAGG

mismatches: 0
bulges: 0
View larger
pre-miRNA
 TGATCCCCATCTGTTTGGTTGCTGAGAAAATTAATCATAGAAGAGTCGTATATAAATATTAACCAGGTGTTTTGGAATTTGGATTCTTTTTAATATATAG
TACTAAAATGATGAATTTTTCAAAAAGGAAGCCTCAAAAACTTTCCTGTTTGTGTGTGTTTTTTTTTCTAACGTTTTCTCAGCAACCAAACGGAGGCTCA
GA

dot-bracket secondary structure
(((.((...((((((((((((((((((((((......((((((((....(((((.....(((.((((.(((((.((....((.((((((((.........
...........((((...)))))))))))).)))).)))))...)))).)))..)))))...))))))))..)))))))))))))))))))))))).)))
..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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