ABOUT THIS RECORDspecies: Homo sapiens
miRNA family: mir-196
source: miRNEST
Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGGTAGTTTCCTGTTGTTGG miRNA* GACAGCACGACACTGCCTTCA mismatches: 3 bulges: 0 |
pre-miRNA
GCACCTGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTTCAGTTGANATCG
dot-bracket secondary structure
.......((((((..((((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..)))))).)))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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deep sequencing data evidence
GCACCTGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTTCAGTTGANATCG
dot-bracket secondary structure
.......((((((..((((((..(((((((.((.(((((((((((...........))))))))))).)).)))))))..)))))).)))))).......
SIMILARITIES| miRBase oan-mir-196b: 3e-35 PMRD no hits microPC no hits | UniProt no hits RFAM mir-196: 3e-29 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
deep sequencing data evidence
