miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST000824
species: Guizotia abyssinica
miRNA family: MIRf225
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
ATGACTTGGTCAATCATGAAG

miRNA*
TTATGATCTGACTTATCATGG

mismatches: 3
bulges: 2

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pre-miRNA
GTTAAACATTGATGACTTGGTCAATCATGAAGATGTTTATGATCTGACTTATCATGGATATGTGA

dot-bracket secondary structure
.....((((..((((...(((((((((((((....)))))))).)))))..))))....))))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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