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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000827
species: Guizotia abyssinica
miRNA family: MIRf789
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCGGTTCAATAAAGCTGTGG

miRNA*
 ACGGCTTTCTTGAACTGCATG

mismatches: 1
bulges: 0
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pre-miRNA
 CTGCCATAAAAATGGTTCTCTTTCTATTCTTCCACGGCTTTCTTGAACTGCATGGGGTTTGATCTACCAGATCTGCGTTTTTATATGCAATCTTTGCGGT
TCAATAAAGCTGTGGGAAGATAGAGACAGAATCAAAACCAGAAGA

dot-bracket secondary structure
............(((((((.((((((((.((((((((((((.((((((((((.(((....(((((...)))))(((((......))))).))).))))))
)))).)))))))))))).)))))))).)))))))...........


SIMILARITIES
miRBase aly-MIR396a: 0.00000000003

PMRD ath-miRf11010-akr: 0.000000000002

microPC miR396: 2e-30		UniProt no hits

RFAM MIR396: 0.0000000006		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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