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Species belonging to selected taxon:

Macaca fascicularis, Papio anubis, Homo sapiens, Pongo abelii, Macaca nemestrina, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST008270
species: Homo sapiens
miRNA family: mir-198
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGTCCAGAGGGGAGATAGGTT

miRNA*
 TTTTCCTTCTTCTCTATAGAATAA

mismatches: 5
bulges: 1
View larger
pre-miRNA
 GCGTCCGCATTGGTCCAGAGGGGAGATAGGTTCCTGTGATTTTTCCTTCTTCTCTATAGAATAAATGAAATC

dot-bracket secondary structure
((....)).(((.((...((((((((.(((.((....)).....)))))))))))...)).)))........


SIMILARITIES
miRBase ggo-mir-198: 7e-29

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-198: 7e-23		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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