miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta

ABOUT THIS RECORD

ID: MNEST008280
species: Homo sapiens
miRNA family: miR-2164
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTATATTTGATTCACTAAGAA

miRNA*
TTTGTTGCTAATCAGACATGAAA

mismatches: 3
bulges: 2

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pre-miRNA
TAAATAATTTTAAATCTGATTTCGAGCAAGTTCCGTAAGTATTTTGTTGCTAATCAGACATGAAATGTGTAAATATGTAAATTTCGTACTGCACTTCTTT
TTATATTTGATTCACTAAGAAACTCACAGGTTGTTATAGTCTCAGAGTTTCATTTTTATT

dot-bracket secondary structure
....((....))..(((((.((..(((((..((.((.(((.(((((.((..(((((((.((((((.(((((..((((.......)))).)))))....))
)))).))))))))).))))).))).)).)))))))..))..)))))..............

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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