miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000831
species: Guizotia abyssinica
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Guizotia abyssinica Guizotia Millerieae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAATCGTCATCATCATCATCA

miRNA*
AGTGCTGATGATTTTTGTTCAA

mismatches: 4
bulges: 2

View larger
pre-miRNA
AAAAAGCACCTGCTGGAATCGTCATCATCATCATCATCATGGATTCGAAAGAGGATAAGGTAAGTGCTGATGATTTTTGTTCAAATTTCTACCGAT

dot-bracket secondary structure
....(((....))).(((.((..(((((((.(((.(((.((..(((....)))..)).)))..))).)))))))...)))))..............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;