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Species belonging to selected taxon:

Helianthus argophyllus



ABOUT THIS RECORD

ID: MNEST000833
species: Helianthus argophyllus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Helianthus argophyllus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCTTCT

miRNA*
AGGCTGATGATGATTTGGAA

mismatches: 2
bulges: 1

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pre-miRNA
TTCTCTCCACCCAACCACCTTCCTCCAATCATCATCATCATCATCATCTTCTTTAACCTCTCAGAAACAACACACAGTGAAGGGAACTAGTGTGTGTAAA
CCAGTGTGTAGATTACCAAACTACCCTCCACATATCTCCAAGAGAAGTCTATCCGTAAACCTTACTTCACTTTTCTTGTTGTCCTTAACTGGAAATGCCA
ATGCTGCCATTTTAGAGGCTGATGATGATTTGGAACTCCTGGAGAAAGTGAAGCAAGATAGAA


dot-bracket secondary structure
.(((.((........(((.(((.((((....(((..((((((((((.(((((.........(((..........((((.((((((((.((.(((.((((.
...(((((.((..............)).))))).((((...)))).((.((....)).)).))))..)))....)).))).))))).)))).........
...))).......))))).)))))))))).)))......))))))).)))......)).))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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