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Species belonging to selected taxon:
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST008342
species:
Medicago truncatula
miRNA family:
MIR2675
source:
miRNEST
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGGCATATTTGTAGGGACC
miRNA*
TCCCTGCNAATATGTCTCGTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
ANAAAGTTTTGG
TCCCTGCNAATATGTCTCGTT
TTGATTTTANTCCCTGTAATTATTTTTGCAGTGACCATTTTAAAAATCAAAAGATTTTGCAATGACT
ATTTTTTTAATAAATGGGTTCAGTCATCATGTGCCTTATCATGTGCCACGTGTGCNAATCATCNCAAAAATGAAGTCAGGGACCAAAACCAAAA
TGAGGC
ATATTTGTAGGGACC
NAAACCATA
dot-bracket secondary structure
.....((((.((
(((((((.(((((((((((((
(((.((((..((((((...(((((((((..((((.((((...((((((....))))))..)))).((
((((.......)))))).((..((...((((((...(.....)...)))))).)).))))))..)))))))))...))))))..)))).)))))
))))))
))))).)))))))))
.))))....
SIMILARITIES
miRBase
mtr-MIR2675b
:
0.00005
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record