miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008343
species: Medicago truncatula
miRNA family: MIR1510
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGGAGGATTAGGTAAAACAAC

miRNA*
 TGTCTTACCCATTCCTCCCAT

mismatches: 5
bulges: 0
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pre-miRNA
 AGAAAGTTGCTATTGCAATAGTTGTCTTACCCATTCCTCCCATCCCATAAATCTATTATATGTACTCCATCATCATATGGATCCACTCTTGTGTTATGAT
AATAGAGTCGCATGATAGGAATCTTGGATCGGAGGATTAGGTAAAACAACTATTGCATTACGCTTTATA

dot-bracket secondary structure
..(((((...((.((((((((((((.(((((...((((((.((((......((((((((.((.((((.((.((((((.(((.....))).....))))))
.)).)))))).))))))))......)))).))))))...))))).)))))))))))).)).)))))...


SIMILARITIES
miRBase mtr-MIR1510a: 9e-83

PMRD mtr-miR1510a: 9e-83

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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