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Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000835
species: Helianthus argophyllus
miRNA family: MIR157
source: miRNEST

Taxonomy by NCBI:
Helianthus argophyllus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTTCTCTTTCTGTCAGGG

mismatches: 0
bulges: 2
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pre-miRNA
 TGGTTGAGAACTGACAGAAGAGAGTGAGCACTCGCCGGCAACCGTATATAGAGATTATACTCTTGTTGGAATTATGCGTGTGCTCACTTCTCTTTCTGTC
AGGGTCCTATT

dot-bracket secondary structure
.......((.(((((((((((((((((((((.(((......(((.....((((......))))...)))......))).)))))))).)))).)))))))
))..)).....


SIMILARITIES
miRBase osa-MIR156l: 0.000001

PMRD vvi-miR156b: 0.000001

microPC miR156: 6e-46		UniProt no hits

RFAM mir-156: 0.00002		most similar mature miRNAs

Identical with: miR156 from microPC (MNEST046709)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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