miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008350
species: Medicago truncatula
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTACTCCCTCCGTCCCAAATT

miRNA*
 TTTGGGACGGAGGGAGTATAT

mismatches: 1
bulges: 0
View larger
pre-miRNA
 ACTCTTATGTATTACTCCCTCCGTCCCAAATTGTATGTCGCTTTAGGGAAATTTTTTGTCCCAAATTATATGTCGCTTTACAATACCAATGTTACTTTTC
CTATTATAACCTTAGTTATTTATTACTCTCTCTTCTTTCAATTCTTTCATTTATCTTTCCCATATTATTTATTAAGGACAATTTTGTAAAACAACTCATA
ATATCTCTTTTCCATACGATATTAATTGCATTTCTTAATATGTGTAAAATACTTAAAACGTCATACAATTTGGGACGGAGGGAGTATATGATTATTA

dot-bracket secondary structure
............(((((((((((((((((((((((((.((.((((((...(((((((((((.((((.(((((............................
............................................................))))).)))).....))))))..((((...))))....((
(((((............)))))))..(((((........))))).))))).)))))).)).)))))))))))))))))))))))))...........


SIMILARITIES
miRBase tae-MIR1133: 0.001

PMRD osa-miRf11216-akr: 0.0002

microPC no hits		UniProt no hits

RFAM MIR806: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;