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Species belonging to selected taxon:

Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008449
species: Sorghum bicolor
miRNA family: MIRf75
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGCGAGACGAATCTTTTTAGC

miRNA*
 TTAATAAATTTGTCTTGCAGT

mismatches: 5
bulges: 0
View larger
pre-miRNA
 ACATTAAATGTAGATAAAAAAATAAACTAATTACACAGTTTAGTTGAGAATCGCGAGACGAATCTTTTTAGCCTAGTTACTCCATGATTAGCCTTAAGTG
CTACAGTAACCCACATATGCTAATGACAGATTAATTATGCTTAATAAATTTGTCTTGCAGTTTCCTGACGAGCTATGTAATTTGTTTTTTTATTAGTTTC
TAAAAACCC

dot-bracket secondary structure
((((...)))).((((((((((((((....(((((.(((((.((((.(((..(((((((((((...((.(((.((((((.((....((((((..((.(((
...........))).)).))))))....)).)))))).))).))...)))))))))))...))).))))))))).))))))))))))))))))).((((.
...))))..


SIMILARITIES
miRBase osa-MIR2124a: 0.0000000000002

PMRD osa-miRf10437-akr: 3e-21

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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