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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008451
species: Sorghum bicolor
miRNA family: MIR812
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAATAAGACGAGTGGTCAA

miRNA*
 GACCACTCGTCTTATTCAAAG

mismatches: 0
bulges: 0
View larger
pre-miRNA
 CCATGTACCATAATAGGGTACTCAATCCATCCCAAATTGTAAGTCGTTTGACTTTTTTAATATCAAGTTTGACCACTCGTCTTATTCAAAGTTTTGTATA
AAATATCACTTTTTTTTTGTTGTGTATTGGTTTATTAATAAAAGTTCTTCAAGAATAACTTAAATTTGACTATATTTGCACAAATTTTTTGAATAAGACG
AGTGGTCAAACTTGGTGTAAAAAAAGTCAAACGACTTACAATTTGGGATGGAGGGAGTACTACTGTACCATCTTTTTT

dot-bracket secondary structure
............(((((((((((..(((((((((((((((((((((((((((((((((.((((((((((((((((((((((((((((((((.(((((...
((((((.......(((..(((((...((((...(((......)))...))))..)))))..))).......))))))..)))))..))))))))))))))
)))))))))))))))))).)))))))))))))))))))))))))))))))))..))))))).))))............


SIMILARITIES
miRBase osa-MIR818e: 0.00000000002

PMRD osa-miRf10207-akr: 0.00000000002

microPC miR806: 0.0000002		UniProt no hits

RFAM MIR806: 7e-79		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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