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Species belonging to selected taxon:

Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008454
species: Sorghum bicolor
miRNA family: MIR168
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGCTTGGTGCAAATCGGGAC

miRNA*
 CCCACCTTGCACCAAGGGAAT

mismatches: 5
bulges: 0
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pre-miRNA
 GCCACGTCGGGTTCGCTTGGTGCAAATCGGGACCTGCGGCCCTGCTCGGACCGGACAGATCCCACCTTGCACCAAGGGAATCCGAGCCG

dot-bracket secondary structure
).....((((((((.((((((((((...((((.((((((.((.....)).)))..))).))))...)))))))))).))))))))....


SIMILARITIES
miRBase sbi-MIR168: 3.0E-25

PMRD sbi-miR168: 3.0E-25

microPC miR168: 2.0E-32		UniProt no hits

RFAM 8MIR168: 6.0E-24		most similar mature miRNAs

Identical with: miR168 from microPC (MNEST046040)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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