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Species belonging to selected taxon:

Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008458
species: Sorghum bicolor
miRNA family: MIR528
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAAGGGGCATGCAAAGGAG

miRNA*
 CCTGTGCCTGCCTCTTCCATT

mismatches: 2
bulges: 0
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pre-miRNA
 CTGTAGCAGCAGCAGCAGCAGTGGAAGGGGCATGCAAAGGAGCACAAGGCTTGGCTGGAAGCCGACCTACGCCTCGCTGGCTCTCCTGTGCCTGCCTCTT
CCATTCCTTCTGCTACGCTATGA

dot-bracket secondary structure
..(((((...(((((.((.(((((((((((((.(((.(((((....(((.((((((...)))))))))..(((.....))).))))).))).))))))))
))))).)).)))))..)))))..


SIMILARITIES
miRBase sbi-MIR528: 1e-37

PMRD osa-miR528: 0.00009

microPC miR528: 4e-41		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR528 from microPC (MNEST046551)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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