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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008478
species: Sorghum bicolor
miRNA family: MIR2504
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACCAAGTTTATAGAAAAT

miRNA*
 TTTTCTACAAACTTGGTTAAAG

mismatches: 1
bulges: 1
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pre-miRNA
 AAAGTTTTTATACTCCCCAATTCCAAAATGTTGGTTGTTTTAGTTTTTGTCATAAGTAAATTCTCTCCAACTTTGACCAAGTTTATAGAAAATACACCAA
CATGGCAACATCTACAAAATGAAATGAATTTCGTAAAATCTATTTTGAATATTCTTGATAGTGCAATTATTTGGTATTGCTGATGTTAGTATATTTTTCT
ACAAACTTGGTTAAAGTTAGAGAAGTTTGACTTATGATAAAACCAAAACGACCTACATTTTGGAGTGGATGGAGTACAAAATAGA

dot-bracket secondary structure
.....((((.(((((((((.(((((((((((.(((((((((.(((((.(((((((((...((((((..((((((((((((((((.(((((((((.((.((
((((((((.(((....((.((....((((....(((((....)))))...)))).........)).))....))).))))).))))).)).)).))))))
).)))))))))))))))))))))).....)))))))))))))).))))))))).))))))))))))))..)))))).))))....


SIMILARITIES
miRBase sbi-MIR437n: 2e-100

PMRD sbi-miR437n: 2e-100

microPC miR437: 3e-99		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: sbi-miR437n from PMRD (MNEST054510)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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