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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008484
species: Sorghum bicolor
miRNA family: MIRf10
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTAGGCTTAAAAGATTCGTCT

miRNA*
 ACAAATTTATTAAGCATAATT

mismatches: 4
bulges: 0
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pre-miRNA
 AGCATGCTTGGCCTGTTTAGATTGGGGCTGAAAATTTTTTGGGTGTCACATCGAATGTGTGGGAAGGATGTCGGGAGGGATTTTTAGAAACTAATAAAAA
AATAAATTACATAGCTCGTCAGGAAACTGCAAGACAAATTTATTAAGCATAATTAATCTGTCATTAGCATATGTGGGTTACTGTAGCACTTAAGGCTAAT
CATGGAGTAACTAGGCTTAAAAGATTCGTCTCGCGATTCTCAACTAAACTGTGTAATTAGTTTATTTTTTTATCTACATTTAATGTTCCATGCATGTGTC
CAAAGATTCGATGGGATGGATGAAAAAATTTTTGGTGGGGAACTAAACAGGGCCTAAGAAT

dot-bracket secondary structure
......((((((((((((((.((...((((((((((((((...((((.((((((((...((((....(((.((...(((((..(((((.....(((((((
((((((((((((((...((..((((..(((.((((.(((((.((((((.((.(((.(((((.((((((.....(((((.........)))))..))))))
.))))).))).)).)))))).))))).)))).))).))))..))....)))))))....)))))))))))))).....))))).))))).)))))...))
))...)))))))).))))....))))))))))))))...)).))))))).)))).)))...


SIMILARITIES
miRBase osa-MIR2124a: 0.0000000000003

PMRD osa-miRf10806-akr: 1e-21

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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