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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008490
species: Sorghum bicolor
miRNA family: MIR444
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCAGTTGTTGTCTCAAGCTT

miRNA*
 GCTAGAGGCAGCAACTGCATA

mismatches: 1
bulges: 0
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pre-miRNA
 ATTAATGCAAGGGGCGGTGACAAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGGTTTTTGAACCATACCGATCATTTTCTTGCAAGTTGTGCA
GTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAA

dot-bracket secondary structure
......((((((((.((((.((((((.(((((((((((((((((.(((((((((((((((((...((...)).)))))...)))))))))))).))))))
))))))))))).)))))).)))).)))))))).....


SIMILARITIES
miRBase ssp-MIR444c: 8e-52

PMRD pvi-miR444: 1e-53

microPC miR444: 1e-56		UniProt sp|Q6EP49|MAD27_ORYSJ: 0.0001

RFAM MIR444: 4e-60		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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