miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST008504
species: Culex quinquefasciatus
miRNA family: mir-467
source: miRNEST

Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTGTGTGTGTTTGTCCAT

miRNA*
 CGACATTACACGCACGCCATT

mismatches: 4
bulges: 2
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pre-miRNA
 TAAACGATCAAGCGACATTACACGCACGCCATTTTCGTTTCCCTCCCCAGCTTTGTCCCTTTCTAACTCTCTCTTCCGCGCTGTTCAAATGATAAATTAT
AGCCGGTTTTTAACAGATCATATCAACAAGGAAACCCAACAGTTTTTTTTGTTTGTGTGTGTGTGTTTGTCCATATCCTCCCC

dot-bracket secondary structure
.............((((..((((((((((((.....((((((..........((((.....(((...........(((.(((((...(((.....)))))
))))))........)))........))))))))))..(((((......))))))).)))))))))).))))............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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