ABOUT THIS RECORDspecies: Culex quinquefasciatus
miRNA family: miR-3217
source: miRNEST
Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAGTTTATGTTTTTTTTTA miRNA* AAAAGTTGTATTTTCTGAC mismatches: 3 bulges: 2 |
pre-miRNA
GTGGTCTGATTCAGAGTTTATGTTTTTTTTTAATATTAAAAAGTTGTATTTTCTGACTAATACTA
dot-bracket secondary structure
..(((.....((((((..((((...(((((((....))))))).))))..)))))).....))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GTGGTCTGATTCAGAGTTTATGTTTTTTTTTAATATTAAAAAGTTGTATTTTCTGACTAATACTA
dot-bracket secondary structure
..(((.....((((((..((((...(((((((....))))))).))))..)))))).....))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
