ABOUT THIS RECORDspecies: Chlamydomonas reinhardtii
miRNA family: miR1847.1
source: miRNEST
Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCAGTGTGCAGTTGTGGCTA miRNA* GCACCTTGCACACTGGCCT mismatches: 3 bulges: 2 |
pre-miRNA
GCGCTTCGCGTTCCTCCGGACAGCAGTGTGCAGTTGTGGCTACCTTACTTGATTATTGGCACCTTGCACACTGGCCTTCATTCCCCTTGGCTTCC
dot-bracket secondary structure
((((...))))(((...)))...((((((((((..(((.(((..............)))))).))))))))))(((............)))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GCGCTTCGCGTTCCTCCGGACAGCAGTGTGCAGTTGTGGCTACCTTACTTGATTATTGGCACCTTGCACACTGGCCTTCATTCCCCTTGGCTTCC
dot-bracket secondary structure
((((...))))(((...)))...((((((((((..(((.(((..............)))))).))))))))))(((............)))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
