miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Botryococcus braunii, Coccomyxa sp. C-169, Volvox carteri, Chlamydomonas reinhardtii

ABOUT THIS RECORD

ID: MNEST008514
species: Chlamydomonas reinhardtii
miRNA family: MIRf1295
source: miRNEST

Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGGCATGCGTGTCAAAGCTAC

miRNA*
AGCATTCCTTGCATGCTTCC

mismatches: 4
bulges: 1

View larger

pre-miRNA
TTTTTTCCGGTAGCATTCCTTGCATGCTTCCCGACGGGCATGCGTGTCAAAGCTACCGCACCCAC

dot-bracket secondary structure
.......(((((((.((...(((((((((......)))))))))....)).))))))).......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record