ABOUT THIS RECORDspecies: Saccoglossus kowalevskii
miRNA family: miR-2445
source: miRNEST
Taxonomy by NCBI:
Saccoglossus kowalevskii Saccoglossus Harrimaniidae Enteropneusta Hemichordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTCCTTTCTCTTTTTTCTTTC miRNA* GTAGAAAGAGAGCGAGCGAAAT mismatches: 4 bulges: 1 |
pre-miRNA
CACAGAGTGTCCTTTCTCTTTTTTCTTTCTCTCACTATTAATATAGGCGAGAAACCGAGTAGAAAGAGAGCGAGCGAAATTCAAG
dot-bracket secondary structure
....((((.(((((.(((((((((..(((((((.((((....))))..))))....)))..))))))))).))).)).))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACAGAGTGTCCTTTCTCTTTTTTCTTTCTCTCACTATTAATATAGGCGAGAAACCGAGTAGAAAGAGAGCGAGCGAAATTCAAG
dot-bracket secondary structure
....((((.(((((.(((((((((..(((((((.((((....))))..))))....)))..))))))))).))).)).))))...
SIMILARITIES| miRBase bta-mir-2445: 0.001 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
