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Species belonging to selected taxon:
Acropora millepora
,
Nematostella vectensis
,
Acropora palmata
,
Anemonia viridis
,
Montastraea faveolata
,
Metridium senile
,
Porites astreoides
,
Aiptasia pallida
ABOUT THIS RECORD
ID:
MNEST008534
species:
Nematostella vectensis
miRNA family:
miR-2049
source:
miRNEST
Taxonomy by NCBI:
Nematostella vectensis
Nematostella
Edwardsiidae
Actiniaria
Hexacorallia
Anthozoa
Cnidaria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GATTCATTTGCATGCATTTGC
miRNA*
AGATGCGTGCAAATGAAGATG
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATTACTAAGGCTAAGTTCAAACGTTGTATTGTCCATGGGCCGTGTTCAGTGC
AGATGCGTGCAAATGAAGATG
ATACAATCGACTA
GATTCATTTGCATG
CATTTGC
ATTGAATGCGGCTGATGAGTAGTACGACGTTTGAACTTAGCCTAAGAAA
dot-bracket secondary structure
....((.(((((((((((((((((((((((((.(((.(((((((((((((((
(((((((((((((((((..((
((...))))....
..))))))))))))
)))))))
))))))))))))).))).))))))))))))))))))))))))).))...
SIMILARITIES
miRBase
nve-mir-2049
:
9e-18
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record