miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acropora millepora, Nematostella vectensis, Acropora palmata, Anemonia viridis, Montastraea faveolata, Metridium senile, Porites astreoides, Aiptasia pallida



ABOUT THIS RECORD

ID: MNEST008547
species: Nematostella vectensis
miRNA family: miR-2049
source: miRNEST

Taxonomy by NCBI:
Nematostella vectensis Nematostella Edwardsiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAAATGCATGCAAATGAAGAT

miRNA*
 ATTCATTTGCATGCATTTGCA

mismatches: 3
bulges: 0
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pre-miRNA
 GCGTTTCAGGCTTAGTTCAAACGTCGTATTGTCCATGAGCCGTGTTCAGTGCAAATGCATGCAAATGAAGATAAAACAATCGACTCGATTCATTTGCATG
CATTTGCATGGAGTGCGGCTCATGGATGGTGCGACGTTTGAACTTAGCCTCAGAAA

dot-bracket secondary structure
...(((.(((((.((((((((((((((((((((((((((((((((((.(((((((((((((((((((((...................))))))))))))
))))))))).)))))))))))))))))))))))))))))))))).))))).)))..


SIMILARITIES
miRBase nve-mir-2049: 2e-25

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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