miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Helianthus exilis
ABOUT THIS RECORD
ID:
MNEST000855
species:
Helianthus exilis
miRNA family:
MIR1533
source:
miRNEST
Taxonomy by NCBI:
Helianthus exilis
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATAATAAAAATAATAATAACA
miRNA*
TGCATTATATATTTTTAATAGCT
mismatches:
4
bulges:
2
View larger
pre-miRNA
TTCTTTCTTTTTTTTTCTTTA
ATAATAAAAATAATAATAACA
ATAAAGTCCTGTCCCGTTTTAAGTGTTTTAACCCCCGATCACTGCTACCCTTTCCGAT
TGATCTGAGCCCCATAACGCTTGTCAAGGCTCTGCCTGACTAAAGTTTATTAGGGTTTTGTCTCGTGACATAGGGGCAATGTTGAATTAGGGGTAGTAAA
CGAG
TGCATTATATATTTTTAATAGCT
TAGAAGTTATATCCAAGA
dot-bracket secondary structure
.((((........(((((...
.((.(((((((((((((.((.
.(((((..........)))))..(((((..(((((.(((((.(((..((((.(((((.
.(((..((((((...(((....((((.(((...)))))))....))).....)))))).)))))).))...))))))).))....))).)))))...)))
)).)
)..))))).)))))))).))...
.)))))........))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record