ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: miR-1816
source: miRNEST
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTAGTTTTGTGGTTTTGTTG miRNA* ATGGTGCTTTTAGTTGCTGACTA mismatches: 3 bulges: 2 |
pre-miRNA
GTTACTTCTTGCCACCTTTTTGTTAGTTTTGTGGTTTTGTTGTGTAAAGGTGTGTTAACCACCCACTCTCTCTTTGTTTTCCCGATGGTGCTTTTAGTTG
CTGACTAGTTTTGGTTTTAAGAAGA
dot-bracket secondary structure
....(((((((..(((.((..((((((.(((.(((.((((((.(((((((.(((.........)))....))))))).....)))))).)))..)))..)
))))).))....)))..))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GTTACTTCTTGCCACCTTTTTGTTAGTTTTGTGGTTTTGTTGTGTAAAGGTGTGTTAACCACCCACTCTCTCTTTGTTTTCCCGATGGTGCTTTTAGTTG
CTGACTAGTTTTGGTTTTAAGAAGA
dot-bracket secondary structure
....(((((((..(((.((..((((((.(((.(((.((((((.(((((((.(((.........)))....))))))).....)))))).)))..)))..)
))))).))....)))..))))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
