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Species belonging to selected taxon:

Daphnia pulex, Daphnia magna



ABOUT THIS RECORD

ID: MNEST008577
species: Daphnia pulex
miRNA family: mir-10
source: miRNEST

Taxonomy by NCBI:
Daphnia pulex Daphnia Daphniidae Anomopoda Cladocera Diplostraca Phyllopoda Branchiopoda Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCTCTAGAACCGAATTTGTC

miRNA*
 CAAATTCGGATCTACAGGGT

mismatches: 3
bulges: 1
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pre-miRNA
 CCCACACGAACCTCTCTAGAACCGAATTTGTCTTGTGATGCAACTACAAATTCGGATCTACAGGGTAGATGTAG

dot-bracket secondary structure
.....(((.(((.((.((((.((((((((((.((((...))))..)))))))))).)))).)))))...)))..


SIMILARITIES
miRBase dpu-mir-10: 1e-36

PMRD no hits

microPC no hits		UniProt no hits

RFAM mir-10: 0.00000000002		most similar mature miRNAs

Identical with: dpu-mir-10 from miRBase (MNEST035001)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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