miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST000858
species: Helianthus exilis
miRNA family: MIRf1138
source: miRNEST

Taxonomy by NCBI:
Helianthus exilis Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTCTACATGTGCATACCAACT

miRNA*
TTGGTTATGTTTATGGTGAAGT

mismatches: 4
bulges: 1

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pre-miRNA
GGCTGGGAATATTCTACATGTGCATACCAACTGGAATTGCTGTTGGTTATGTTTATGGTGAAGTGGTCGGTG

dot-bracket secondary structure
.(((((.....(((..((((.((((((((((.((.....))))))).))))).))))..)))....))))).

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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